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ERX000057: Whole Genome Sequencing of human CEU NA07051
8 ILLUMINA (Illumina Genome Analyzer II) runs: 104M spots, 10.6G bases, 64.2Gb downloads

Design: Illumina paired-end sequencing of Human HapMap individual NA07051 random 200 bp library
Submitted by: Illumina Cambridge Ltd. (ILLUMINA)
Study: 1000 Genomes Project Pilot 1 (low coverage sequencing of 180 Hapmap individuals from multiple populations.
show Abstracthide Abstract
1000 Genomes first pilot study: Low coverage sequencing of 180 individuals. <P>The purpose of the project is to support the discovery and understanding of genetic variants that influence human disease. Specifically defined goals are (a) the discovery of single nucleotide variants at frequencies of 1% or higher in diverse populations, (b) even more comprehensive discovery (variants down to frequencies of 0.1 - 0.5%) in functional gene regions, and (c) discovery of structural variants, such as copy number variants, other insertions and deletions, and inversions, including sequence-level understanding of breakpoints.</P> <P>The volume of data generated by 1000genomes project is unprecedented.</P> The data is accessible from two mirrored ftp sites at <A HREF="ftp://ftp.1000genomes.ebi.ac.uk">EBI</A> and <A HREF="ftp://ftp-trace.ncbi.nih.gov/1000genomes/">NCBI</A>.
Sample: Coriell GM07051
SAMN00797154 • SRS000035 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: CT1911
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Standard Illumina paired-end library construction protocol. Genomic DNA was randomly fragmented using nebulisation and a 200 bp fraction was obtained by gel electrophoresis.
Spot descriptor:
forward52  reverse

Experiment attributes:
center_name: Illumina
Runs: 8 runs, 104M spots, 10.6G bases, 64.2Gb
Run# of Spots# of BasesSizePublished
ERR00054510,980,8411.1G6.8Gb2010-02-19
ERR00054613,325,9691.4G8.3Gb2010-02-19
ERR00054713,560,1411.4G8.4Gb2010-02-19
ERR00054813,569,2441.4G8.3Gb2010-02-19
ERR00054913,523,6101.4G8.4Gb2010-02-19
ERR00055013,318,9131.4G8.2Gb2010-02-19
ERR00055113,034,8301.3G8Gb2010-02-19
ERR00055212,717,7471.3G7.8Gb2010-02-19

ID:
17181

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